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How Does Science Really Work? The Myth of the Great Experiment: Crash Course Scientific Thinking #3
How Does Science Really Work? The Myth of the Great Experiment: Crash Course Scientific Thinking #3
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11:00 · Feb 10, 2026
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So,
who
has
saved
the
most
lives
in
history?
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0:00
So, who has saved the most lives in history?
0:02
I could make the case that it was the French chemist Louis Pasteur.
0:05
It’s thanks in part to his work
0:08
that we understand where germs come from.
0:10
A lone scientific genius whose experiment saved millions of lives… Or at least,
0:16
that’s the story we are so often told.
0:18
But the more complex truth can teach us a lot about how science really
0:23
works.
0:23
Hi!
0:24
I’m Hank Green, and this is Crash Course Scientific Thinking.
0:32
Now, please do not get me wrong.
0:33
Pasteur was a smart dude.
0:35
And his work really was revolutionary.
0:37
There have been plenty of brilliant individual scientists throughout history.
0:41
Ibn Sina.
0:42
Marie Curie.
0:43
George Washington Carver.
0:45
All of them did some very cool stuff.
0:47
Including making lots of delicious snacks out of peanuts.
0:51
But here’s the thing:
0:52
none of them could have done what they did without the support of the
0:55
scientific community around them.
0:57
As Isaac Newton himself famously said,
0:59
“If I have seen further it is by standing on the shoulders of giants.”
1:03
It is very rare for just one person, or one experiment,
1:07
to change our understanding of the world.
1:09
Behind each breakthrough, there’s a community of scientists,
1:13
connecting across decades through many experiments, all in the name of scientific progress.
1:20
Like, today, germ theory is common knowledge
1:22
we know that certain microbes can invade our bodies and make us sick.
1:25
It is hard to overstate how game-changing this knowledge has been.
1:29
Because of it we have vaccines!
1:30
Antiseptics!
1:31
And doctors who wash their hands before surgery!
1:34
And Pasteur often gets credit for developing germ theory.
1:37
But there’s a lot more to it than that.
1:39
By the early 19th century,
1:41
scientists knew that microbes existed thanks to the invention of the microscope.
1:45
But at the time,
1:46
many people thought microbes arose spontaneously from rotting food and flesh.
1:50
Delicious.
1:51
And though that idea of “spontaneous generation” had a long line of doubters,
1:56
nobody had convincingly presented evidence that put it to bed.
2:00
So picture this.
2:01
It’s the 1860s.
2:02
Just a couple of years earlier,
2:03
Charles Darwin had published a new book about evolution
2:06
that was reshaping how scientists thought about where life comes from.
2:10
It was a time of shifting worldviews.
2:13
Other scientists had hypothesized that microbes already existed, all around us.
2:18
They lived and traveled on microscopic particles in the air,
2:22
occasionally landing in an environment (like spoiled food
2:25
or an open wound) where they could cause disease.
2:28
Enter Louis Pasteur.
2:30
He was skeptical of spontaneous generation
2:33
and wanted to test this claim
2:34
that microbes floated in the air.
2:36
He knew that he would have to start with something completely free of microbes.
2:40
So, he heated up a broth
2:41
that was crawling with them until all the microbes were dead (an early example
2:45
of sterilization).
2:46
And then, as the broth cooled, he exposed it to the air.
2:50
Before long—it was a microbe pool party once again.
2:55
In his eyes, this was evidence
2:57
that microbes didn’t just arise spontaneously—
3:00
that this new idea was right,
3:02
and that microbes hitchhiked into the broth through the air.
3:06
But not everyone was convinced.
3:08
The idea that microbes float in the air just sounded really bizarre.
3:12
One biologist at the time, Félix Pouchet, reasoned that if that were true,
3:17
“the air in which we live would almost have the density of iron.”
3:21
And besides, the skeptics said, the experiment hadn’t totally ruled out spontaneous generation.
3:26
What if fresh air was the thing that makes life burst forth in liquid?
3:31
But listen, Pouchet and the skeptics weren't just being haters.
3:36
Exactly the opposite: they were being scientists.
3:39
Nobody, not even Pasteur,
3:41
could design and refine such great experiments without being challenged
3:45
and inspired by their peers.
3:47
This back-and-forth skepticism and critique is all part of what makes science such an
3:52
effective tool for building knowledge.
3:55
So Pasteur was like: “Hold my flask.”
3:57
And he set out to gather more evidence.
4:00
This time, he followed the same steps as before,
4:02
but he used a swan-neck flask, a glass container with a long,
4:06
curvy neck.
4:07
After sterilizing his broth, he opened it to the air again.
4:11
Only this time, he observed a lack of new microbial growth in the flask.
4:15
Air still got in, but since nothing formed,
4:18
he concluded that the microbes got trapped in the curving neck of the flask.
4:22
Which meant the germs had to be traveling in from the air,
4:26
not arising from the sterile environment of the liquid.
4:29
And then, just to be sure,
4:31
he tipped the flask sideways
4:33
so the microbes that had gathered in the neck slid down into the broth.
4:37
And sure enough, it was microbecity again.
4:40
“But what if in that test,
4:41
you somehow destroyed the life force in the liquid
4:44
and that’s why microbes didn’t burst forth?”
4:46
the skeptics might say.
4:48
Well, Pasteur thought of that, too.
4:50
He iterated with several more types of flasks, with the same conclusion.
4:55
Which just tells me
4:55
that so much of science history has relied on excellent glassblowers.
4:59
Pasteur’s work ultimately led people to move away from the idea of spontaneous generation,
5:05
which paved the way for germ theory as we know it today.
5:08
And he went down in history for the experiment he designed.
5:12
‘Cause it was a great experiment.
5:14
He treated the shape of the flask as an independent variable:
5:17
a factor that can be changed so its effects can be observed.
5:21
The presence of microbes was a dependent variable,
5:23
an outcome that’s measured to understand its relationship to the independent variable.
5:28
Those are some of the hallmarks of any well-designed science experiment.
5:32
But more than that, his experiment presented an elegant,
5:35
creative approach to controlling each of those variables.
5:38
The shape of the flask prevented anything heavier than air from touching the sterile
5:43
broth until Pasteur wanted it to.
5:45
Pasteur’s work was an example of experimental science:
5:48
where scientists formulate a question about the natural world
5:51
and then devise experiments
5:53
and gather evidence to answer the question.
5:56
A lot of times, these experiments happen in controlled situations within laboratories.
6:00
But not always, which can make things more challenging for scientists.
6:04
To understand what that means, I think it’s time for some Sage Advice!
6:16
Hey Hank, did you know that Pasteur himself once said,
6:19
“Everything gets complicated away from the laboratory.”
6:22
He must have been fun at parties.
6:24
But not wrong.
6:25
Right?
6:25
And sure, Pasteur was able to create a super controlled environment by narrowing his
6:30
experiment to this tiny little bit of sterilized liquid.
6:33
In that way, he was able to isolate
6:34
so many other factors
6:35
that could have been affecting the outcome.
6:37
But we can’t always do
6:38
that with the things we’d like to study.
6:40
Right, like something big, the whole climate of the Earth, for example.
6:44
Hard to put into a laboratory.
6:45
Totally.
6:46
We can’t exactly generate a mock Earth with all of its complicated,
6:49
overlapping systems and just port it into the lab.
6:51
So instead, much of what we know about climate change is from measuring the
6:54
stuff that’s out there in the real world,
6:57
like surface temperature, sea level rise,
6:59
and how much carbon dioxide is in the atmosphere now versus in the past.
7:03
We call this observational science:
7:06
when scientists gather evidence by observing events
7:09
that have already happened
7:10
(or would have happened anyway).
7:11
And then use that evidence to form, test, and refine their hypotheses.
7:15
As a self-styled naturalist, observational science is my favorite.
7:18
It's the art of, 'Woah, what's going on over there?
7:20
I gotta write that down.’
7:21
Yeah, science isn’t always about designing the perfect experiment,
7:25
because sometimes an experiment isn’t even the right method for doing science.
7:29
But of course, there are other areas where experimental science is used to understand
7:33
the climate.
7:34
Like, we measure the ways carbon dioxide traps heat in labs all the time.
7:37
Something we’ve been doing ever since Eunice Newton Foote placed glass cylinders of it
7:41
in direct sunlight and observed how it heated it much more quickly than a
7:45
cylinder with ordinary air.
7:46
And that was all the way back in 1856!
7:49
Ultimately, what kind of study works best can depend on a lot of factors.
7:52
And that’s been your Sage Advice!
7:55
Thanks, Sage!
7:57
Another thing scientists have to consider when performing any kind of study is,
8:01
“Can I do this ethically?”
8:02
Like, when I got cancer,
8:03
there were people with my same cancer actively enrolled in a study testing out
8:08
a new treatment.
8:09
It would’ve been unethical for the researchers to give half of those people the
8:12
new treatment and the other half nothing.
8:15
They couldn’t just let those people die of cancer.
8:18
Instead, they gave the other half the treatment I got,
8:20
called "the standard of care."
8:22
Essentially, they ran an experiment testing the new treatment against the old treatment.
8:27
Observational studies, like the ones Sage and I talked about,
8:30
are another ethical way of learning more about a person’s health.
8:33
In these, scientists collect information about each participant’s behavior and their health outcomes.
8:39
And this gets really tricky:
8:41
the world isn’t set up to be interrogated like a research sample in a
8:45
lab!
8:46
Say, for example, you’d like to know how drinking alcohol relates to heart disease.
8:50
Sounds simple; it is not.
8:52
The relationship between those two things could be influenced by other things.
8:56
Like if someone drinks a lot of alcohol,
8:58
they might also eat way more high-calorie foods!
9:02
These potential side influences are called confounding variables – factors
9:06
that can distort the true relationship between the things you want to understand.
9:11
Ideally, observational studies will measure and account for any confounding variables like this,
9:16
but we don’t always know what the confounding variables are.
9:20
And that’s a big part of why science builds on evidence from many different
9:24
types of studies.
9:25
Like, when Pasteur performed his first experiments, the scientific community didn’t just say,
9:29
“Oh, well, case closed.
9:30
Well done, Louis.”
9:31
They pushed for more and more evidence.
9:34
In the end, Pasteur’s experiment was a major turning point in science history.
9:39
But his work was built on a foundation of previous research
9:42
and refined in its day by the healthy skepticism of his peers.
9:47
Not only that, but scientists continued to build on Pasteur’s findings even after he
9:52
published them.
9:52
People like Robert Koch,
9:53
who furthered the study of microbes and eventually discovered the bacteria responsible for tuberculosis.
9:59
I swear, I’m the other Green brother.
10:01
That was just a coincidence.
10:03
And our understanding of disease continues to develop today,
10:06
not only as a result of well-designed experiments,
10:09
but also as a result of really smart observational studies
10:13
and collaboration among the scientific community.
10:16
Next time, we’re gonna talk about peer review,
10:18
and why it is a key part of how science helps us know more
10:22
over time.
10:23
I’ll see you then.
10:24
This episode of Crash Course Scientific Thinking was produced in partnership with HHMI BioInteractive,
10:30
bringing real science stories to thousands of high school and undergrad life science classrooms.
10:35
If you’re a teacher,
10:36
visit their website for resources
10:37
that explore the topics we discussed today in this video.
10:41
Thanks for watching this episode of Crash Course Scientific Thinking,
10:43
which was filmed in Missoula, Montana,
10:45
and was made with the help of all these nice people.
10:48
If you want to help keep Crash Course free for everyone, forever,
10:51
you can join our community on Patreon.
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